Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp7Q8R1T1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Gm22331-201ENSMUST00000158066 136 ntBASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Gm8598-201ENSMUST00000221184 836 ntBASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp7Q8R1T1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Gm43818-201ENSMUST00000200605 466 ntBASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp7Q8R1T1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Gm12384-201ENSMUST00000119228 919 ntBASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp7Q8R1T1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms