Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf4Q8K4J2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ebf4Q8K4J2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf4Q8K4J2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm5479-201ENSMUST00000160578 435 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm16026-204ENSMUST00000162652 683 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm27741-201ENSMUST00000185060 237 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms