Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col23a1Q8K4G2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col23a1Q8K4G2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gm11637-201ENSMUST00000120601 592 ntBASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gm31256-201ENSMUST00000194705 506 ntBASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gm38317-201ENSMUST00000195564 343 ntBASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col23a1Q8K4G2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gm25732-201ENSMUST00000175168 60 ntBASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gm37042-201ENSMUST00000193816 581 ntBASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col23a1Q8K4G2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Gm8099-201ENSMUST00000200510 742 ntBASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Gm4768-201ENSMUST00000206199 686 ntBASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Gm13097-201ENSMUST00000210722 397 ntBASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col23a1Q8K4G2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms