Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rtn1Q8K0T0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Mir698-201ENSMUST00000102164 109 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm37102-201ENSMUST00000195740 1105 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rtn1Q8K0T0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rtn1Q8K0T0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rtn1Q8K0T0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Gm8337-201ENSMUST00000187358 1938 ntBASIC16■□□□□ 0.15
Rtn1Q8K0T0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16■□□□□ 0.15
Rtn1Q8K0T0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rtn1Q8K0T0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms