Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Auts2-212ENSMUST00000178555 309 ntBASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.09□□□□□ -0.31
Rfwd3Q8CIK8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfwd3Q8CIK8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rfwd3Q8CIK8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfwd3Q8CIK8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm3436-201ENSMUST00000179930 840 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm43703-201ENSMUST00000200523 763 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfwd3Q8CIK8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gm27989-201ENSMUST00000184721 107 ntBASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Gm33320-201ENSMUST00000192232 530 ntBASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfwd3Q8CIK8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms