Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lysmd4Q8CC84 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm44719-201ENSMUST00000206404 149 ntBASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Mzt1-203ENSMUST00000227948 952 ntBASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lysmd4Q8CC84 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 BC001981-202ENSMUST00000191393 1545 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lysmd4Q8CC84 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms