Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a6Q8C6K9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a6Q8C6K9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a6Q8C6K9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.5□□□□□ -0.41
Col6a6Q8C6K9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm15808-201ENSMUST00000119046 604 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col6a6Q8C6K9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col6a6Q8C6K9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms