Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm6912-201ENSMUST00000117218 544 ntBASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm15240-201ENSMUST00000118156 720 ntBASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm5425-201ENSMUST00000214125 459 ntBASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc60Q8C4J0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Mir698-201ENSMUST00000102164 109 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm22189-201ENSMUST00000103822 86 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm44855-201ENSMUST00000205725 362 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm9797-201ENSMUST00000052902 613 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm2423-201ENSMUST00000074863 733 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc60Q8C4J0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Mir6977-201ENSMUST00000184960 64 ntBASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Gm7730-201ENSMUST00000212486 454 ntBASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc60Q8C4J0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Gm27437-201ENSMUST00000183429 107 ntBASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Gm17795-201ENSMUST00000214505 757 ntBASIC17.67■□□□□ 0.42
Ccdc60Q8C4J0 Gm6218-201ENSMUST00000219812 628 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms