Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rft1Q8C3B8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Gm18057-201ENSMUST00000208220 503 ntBASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rft1Q8C3B8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.4□□□□□ -0.42
Rft1Q8C3B8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rft1Q8C3B8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rft1Q8C3B8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rft1Q8C3B8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rft1Q8C3B8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rft1Q8C3B8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rft1Q8C3B8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms