Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trub1Q8C0D0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gm12585-201ENSMUST00000117307 290 ntBASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gm10766-202ENSMUST00000194123 606 ntBASIC14.32□□□□□ -0.12
Trub1Q8C0D0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.32□□□□□ -0.12
Trub1Q8C0D0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gm5867-201ENSMUST00000063197 592 ntBASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trub1Q8C0D0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm8927-201ENSMUST00000181978 981 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm4804-201ENSMUST00000182234 999 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm3222-201ENSMUST00000071282 990 ntBASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trub1Q8C0D0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.3□□□□□ -0.12
Trub1Q8C0D0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms