Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sh3rf2Q8BZT2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Gm4984-201ENSMUST00000115987 360 ntBASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sh3rf2Q8BZT2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm13689-201ENSMUST00000119360 685 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Mir1894-201ENSMUST00000122802 81 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm18062-201ENSMUST00000208020 547 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm18055-201ENSMUST00000208254 547 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sh3rf2Q8BZT2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh3rf2Q8BZT2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms