Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp43Q8BUM9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp43Q8BUM9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp43Q8BUM9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Gm15920-201ENSMUST00000118998 402 ntBASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Gm13385-201ENSMUST00000121089 220 ntBASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Usp43Q8BUM9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Usp43Q8BUM9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gm6912-201ENSMUST00000117218 544 ntBASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gm27989-201ENSMUST00000184721 107 ntBASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Gm5425-201ENSMUST00000214125 459 ntBASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp43Q8BUM9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms