Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.21□□□□□ -0.14
Nup54Q8BTS4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup54Q8BTS4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nup54Q8BTS4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup54Q8BTS4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup54Q8BTS4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gm19220-201ENSMUST00000222682 803 ntBASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup54Q8BTS4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup54Q8BTS4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Gm37917-201ENSMUST00000194711 392 ntBASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.18□□□□□ -0.14
Nup54Q8BTS4 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup54Q8BTS4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Nup54Q8BTS4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms