Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Gm45186-201ENSMUST00000206874 478 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Morn2-202ENSMUST00000227729 656 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col16a1Q8BLX7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Gm2231-201ENSMUST00000125661 612 ntBASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col16a1Q8BLX7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col16a1Q8BLX7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col16a1Q8BLX7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Nsd1-205ENSMUST00000224693 852 ntBASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col16a1Q8BLX7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms