Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp2bQ8BJF9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm15957-201ENSMUST00000118893 974 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm18737-201ENSMUST00000173594 937 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm18057-201ENSMUST00000208220 503 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp2bQ8BJF9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm11745-201ENSMUST00000121669 448 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm18206-201ENSMUST00000207027 926 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.22□□□□□ -0.13
Chmp2bQ8BJF9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2bQ8BJF9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms