Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh20Q8BIZ0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh20Q8BIZ0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh20Q8BIZ0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh20Q8BIZ0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh20Q8BIZ0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh20Q8BIZ0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh20Q8BIZ0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Gm6415-201ENSMUST00000118488 348 ntBASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh20Q8BIZ0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms