Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Gm37935-201ENSMUST00000192012 982 ntBASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Gm2756-201ENSMUST00000195851 400 ntBASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.42□□□□□ -0.26
Rnf38Q8BI21 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.42□□□□□ -0.26
Rnf38Q8BI21 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rnf38Q8BI21 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 BC001981-202ENSMUST00000191393 1545 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm13015-201ENSMUST00000118674 204 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm11745-201ENSMUST00000121669 448 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf38Q8BI21 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Mir1895-201ENSMUST00000122615 79 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Gm27494-201ENSMUST00000184735 189 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf38Q8BI21 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms