Protein–RNA interactions for Protein: Q8BFY6

Pef1, Peflin, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pef1Q8BFY6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pef1Q8BFY6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm12882-201ENSMUST00000121696 517 ntBASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm17807-201ENSMUST00000186869 298 ntBASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.93□□□□□ -0.66
Pef1Q8BFY6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pef1Q8BFY6 Gm14859-201ENSMUST00000117752 357 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms