Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Gm5363-201ENSMUST00000211927 938 ntBASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trnp1Q80ZI1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Gm14350-201ENSMUST00000116642 640 ntBASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trnp1Q80ZI1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Gm2231-201ENSMUST00000125661 612 ntBASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Mospd4-201ENSMUST00000180618 576 ntBASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trnp1Q80ZI1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms