Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3tc2Q80VA5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3tc2Q80VA5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh3tc2Q80VA5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3tc2Q80VA5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3tc2Q80VA5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Mir1247-201ENSMUST00000116706 82 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm4804-201ENSMUST00000182234 999 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm2495-201ENSMUST00000191160 466 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm37424-201ENSMUST00000191727 561 ntBASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh3tc2Q80VA5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm14660-201ENSMUST00000119809 575 ntBASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3tc2Q80VA5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms