Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf38bQ80SY5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf38bQ80SY5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.53□□□□□ -0.08
Prpf38bQ80SY5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms