Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.84□□□□□ -0.35
Pif1Q80SX8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pif1Q80SX8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.83□□□□□ -0.35
Pif1Q80SX8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.83□□□□□ -0.35
Pif1Q80SX8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.83□□□□□ -0.36
Pif1Q80SX8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm43630-201ENSMUST00000201550 776 ntBASIC12.83□□□□□ -0.36
Pif1Q80SX8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm17794-201ENSMUST00000220252 955 ntBASIC12.83□□□□□ -0.36
Pif1Q80SX8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.83□□□□□ -0.36
Pif1Q80SX8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.83□□□□□ -0.36
Pif1Q80SX8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.82□□□□□ -0.36
Pif1Q80SX8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.82□□□□□ -0.36
Pif1Q80SX8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.82□□□□□ -0.36
Pif1Q80SX8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.82□□□□□ -0.36
Pif1Q80SX8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms