Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Pcdh8Q7TSK3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm44608-201ENSMUST00000206827 855 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh8Q7TSK3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Gm37714-201ENSMUST00000194742 342 ntBASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Gm18027-201ENSMUST00000218947 619 ntBASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh8Q7TSK3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh8Q7TSK3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms