Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.23■□□□□ 0.03
Sh3d21Q7TSG5 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh3d21Q7TSG5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Gm15460-201ENSMUST00000118147 391 ntBASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sh3d21Q7TSG5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sh3d21Q7TSG5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d21Q7TSG5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d21Q7TSG5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh3d21Q7TSG5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Gm13223-201ENSMUST00000118609 747 ntBASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Sh3d21Q7TSG5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms