Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.29□□□□□ -0.6
Vma21Q78T54 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm2445-201ENSMUST00000182798 989 ntBASIC11.29□□□□□ -0.6
Vma21Q78T54 AA619741-201ENSMUST00000195095 646 ntBASIC11.29□□□□□ -0.6
Vma21Q78T54 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vma21Q78T54 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Vma21Q78T54 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.29□□□□□ -0.6
Vma21Q78T54 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vma21Q78T54 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Rprl2-201ENSMUST00000157150 290 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm29310-201ENSMUST00000185468 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21825-201ENSMUST00000185728 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm29109-201ENSMUST00000185895 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21896-201ENSMUST00000186520 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21873-201ENSMUST00000186728 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21794-201ENSMUST00000187056 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21880-201ENSMUST00000187275 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21826-201ENSMUST00000187451 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21198-201ENSMUST00000188393 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21749-201ENSMUST00000189343 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21901-201ENSMUST00000189568 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm29424-201ENSMUST00000189716 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm28599-201ENSMUST00000189838 694 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21867-201ENSMUST00000189917 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm29269-201ENSMUST00000190087 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21722-201ENSMUST00000190153 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm28423-201ENSMUST00000190701 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21899-201ENSMUST00000190745 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21910-201ENSMUST00000191163 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21849-201ENSMUST00000191571 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm28678-201ENSMUST00000191593 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm20910-201ENSMUST00000193268 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm21871-201ENSMUST00000194621 696 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 Gm20553-201ENSMUST00000204205 844 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.28□□□□□ -0.6
Vma21Q78T54 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vma21Q78T54 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vma21Q78T54 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms