Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm8Q6ZWM4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm8Q6ZWM4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm8Q6ZWM4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.52□□□□□ -0.08
Lsm8Q6ZWM4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm8Q6ZWM4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lsm8Q6ZWM4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm8Q6ZWM4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm8Q6ZWM4 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms