Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Snrnp40Q6PE01 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm7783-201ENSMUST00000204795 781 ntBASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Gm24526-201ENSMUST00000082921 158 ntBASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Snrnp40Q6PE01 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm42627-201ENSMUST00000197347 224 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm18056-201ENSMUST00000207670 568 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm18061-201ENSMUST00000208350 562 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm18063-201ENSMUST00000208529 568 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Gm18052-201ENSMUST00000208750 559 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snrnp40Q6PE01 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snrnp40Q6PE01 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snrnp40Q6PE01 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snrnp40Q6PE01 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms