Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm17376-201ENSMUST00000166016 84 ntBASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Olfr284-202ENSMUST00000206647 966 ntBASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm10608-202ENSMUST00000213924 676 ntBASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc85bQ6PDY0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm37259-201ENSMUST00000193903 849 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm44397-201ENSMUST00000195950 113 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm6082-201ENSMUST00000215204 454 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 App-207ENSMUST00000227737 2827 ntBASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc85bQ6PDY0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Gm11793-201ENSMUST00000120433 981 ntBASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc85bQ6PDY0 Gm43133-201ENSMUST00000197472 463 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms