Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm12363-201ENSMUST00000122250 668 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm26083-201ENSMUST00000157904 193 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm2991-201ENSMUST00000173338 480 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm45865-201ENSMUST00000211815 945 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm22323-201ENSMUST00000103832 109 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd4Q6PDQ2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Gm12241-201ENSMUST00000118330 726 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Gm37042-201ENSMUST00000193816 581 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Gm7783-201ENSMUST00000204795 781 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd4Q6PDQ2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms