Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VclQ64727 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VclQ64727 Syt7-205ENSMUST00000224135 1557 ntBASIC13.66□□□□□ -0.22
VclQ64727 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.66□□□□□ -0.22
VclQ64727 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
VclQ64727 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
VclQ64727 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Gm15321-201ENSMUST00000121290 288 ntBASIC13.66□□□□□ -0.22
VclQ64727 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Gm44855-201ENSMUST00000205725 362 ntBASIC13.66□□□□□ -0.22
VclQ64727 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
VclQ64727 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.66□□□□□ -0.22
VclQ64727 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.66□□□□□ -0.22
VclQ64727 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
VclQ64727 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
VclQ64727 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
VclQ64727 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
VclQ64727 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
VclQ64727 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.65□□□□□ -0.22
VclQ64727 Gm7063-201ENSMUST00000186840 981 ntBASIC13.65□□□□□ -0.22
VclQ64727 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.65□□□□□ -0.22
VclQ64727 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.65□□□□□ -0.22
VclQ64727 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VclQ64727 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.65□□□□□ -0.23
VclQ64727 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
VclQ64727 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
VclQ64727 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VclQ64727 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.64□□□□□ -0.23
VclQ64727 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.64□□□□□ -0.23
VclQ64727 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VclQ64727 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VclQ64727 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VclQ64727 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms