Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.24□□□□□ -0.29
CishQ62225 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.24□□□□□ -0.29
CishQ62225 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.24□□□□□ -0.29
CishQ62225 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Gm24420-201ENSMUST00000176676 59 ntBASIC13.24□□□□□ -0.29
CishQ62225 Gm28760-201ENSMUST00000185995 736 ntBASIC13.24□□□□□ -0.29
CishQ62225 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.24□□□□□ -0.29
CishQ62225 Gm17795-201ENSMUST00000214505 757 ntBASIC13.24□□□□□ -0.29
CishQ62225 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.24□□□□□ -0.29
CishQ62225 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CishQ62225 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CishQ62225 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CishQ62225 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CishQ62225 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.24□□□□□ -0.29
CishQ62225 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CishQ62225 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CishQ62225 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Gm15240-201ENSMUST00000118156 720 ntBASIC13.23□□□□□ -0.29
CishQ62225 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Gm18905-201ENSMUST00000205454 928 ntBASIC13.23□□□□□ -0.29
CishQ62225 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.23□□□□□ -0.29
CishQ62225 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Gm6218-201ENSMUST00000219812 628 ntBASIC13.23□□□□□ -0.29
CishQ62225 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CishQ62225 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.23□□□□□ -0.29
CishQ62225 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.23□□□□□ -0.29
CishQ62225 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CishQ62225 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.22□□□□□ -0.29
CishQ62225 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CishQ62225 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Gm7488-201ENSMUST00000117148 684 ntBASIC13.22□□□□□ -0.29
CishQ62225 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CishQ62225 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.22□□□□□ -0.29
CishQ62225 Gm42612-201ENSMUST00000197986 623 ntBASIC13.22□□□□□ -0.29
CishQ62225 Gm43170-201ENSMUST00000199827 612 ntBASIC13.22□□□□□ -0.29
CishQ62225 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.22□□□□□ -0.29
CishQ62225 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.22□□□□□ -0.29
CishQ62225 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CishQ62225 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CishQ62225 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms