Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.23□□□□□ -0.29
Rai1Q61818 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rai1Q61818 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rai1Q61818 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rai1Q61818 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rai1Q61818 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rai1Q61818 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.22□□□□□ -0.29
Rai1Q61818 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rai1Q61818 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.22□□□□□ -0.29
Rai1Q61818 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rai1Q61818 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Rai1Q61818 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rai1Q61818 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.22□□□□□ -0.29
Rai1Q61818 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.22□□□□□ -0.29
Rai1Q61818 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Gm16372-201ENSMUST00000073088 450 ntBASIC13.22□□□□□ -0.29
Rai1Q61818 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rai1Q61818 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.21□□□□□ -0.29
Rai1Q61818 Gm13342-201ENSMUST00000121055 207 ntBASIC13.21□□□□□ -0.29
Rai1Q61818 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.21□□□□□ -0.29
Rai1Q61818 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.21□□□□□ -0.29
Rai1Q61818 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rai1Q61818 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rai1Q61818 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rai1Q61818 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rai1Q61818 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rai1Q61818 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Gm13786-201ENSMUST00000122371 333 ntBASIC13.21□□□□□ -0.3
Rai1Q61818 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.21□□□□□ -0.3
Rai1Q61818 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.21□□□□□ -0.3
Rai1Q61818 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rai1Q61818 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.2□□□□□ -0.3
Rai1Q61818 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.2□□□□□ -0.3
Rai1Q61818 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.2□□□□□ -0.3
Rai1Q61818 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.2□□□□□ -0.3
Rai1Q61818 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rai1Q61818 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms