Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Gm6745-201ENSMUST00000199216 526 ntBASIC14.45□□□□□ -0.1
Smarcd1Q61466 Gm9794-201ENSMUST00000202370 423 ntBASIC14.45□□□□□ -0.1
Smarcd1Q61466 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd1Q61466 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm11524-201ENSMUST00000119349 807 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm43094-201ENSMUST00000196549 921 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm19078-201ENSMUST00000206311 727 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.44□□□□□ -0.1
Smarcd1Q61466 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd1Q61466 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.43□□□□□ -0.1
Smarcd1Q61466 Gm11424-201ENSMUST00000121929 829 ntBASIC14.43□□□□□ -0.1
Smarcd1Q61466 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd1Q61466 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.42□□□□□ -0.1
Smarcd1Q61466 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.42□□□□□ -0.1
Smarcd1Q61466 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Gm12490-201ENSMUST00000120255 560 ntBASIC14.42□□□□□ -0.1
Smarcd1Q61466 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.42□□□□□ -0.1
Smarcd1Q61466 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd1Q61466 Gm18307-201ENSMUST00000206864 949 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms