Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.99□□□□□ -0.17
Six4Q61321 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Six4Q61321 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Six4Q61321 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Six4Q61321 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.99□□□□□ -0.17
Six4Q61321 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Gm27437-201ENSMUST00000183429 107 ntBASIC13.99□□□□□ -0.17
Six4Q61321 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.99□□□□□ -0.17
Six4Q61321 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.99□□□□□ -0.17
Six4Q61321 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.99□□□□□ -0.17
Six4Q61321 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.99□□□□□ -0.17
Six4Q61321 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six4Q61321 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Six4Q61321 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.98□□□□□ -0.17
Six4Q61321 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Six4Q61321 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.98□□□□□ -0.17
Six4Q61321 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Six4Q61321 Mir6977-201ENSMUST00000184960 64 ntBASIC13.98□□□□□ -0.17
Six4Q61321 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Gm18905-201ENSMUST00000205454 928 ntBASIC13.98□□□□□ -0.17
Six4Q61321 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.98□□□□□ -0.17
Six4Q61321 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.98□□□□□ -0.17
Six4Q61321 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.98□□□□□ -0.17
Six4Q61321 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Six4Q61321 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms