Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.21■□□□□ 0.03
Col11a1Q61245 Gm12566-201ENSMUST00000121479 359 ntBASIC15.21■□□□□ 0.03
Col11a1Q61245 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.21■□□□□ 0.03
Col11a1Q61245 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col11a1Q61245 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col11a1Q61245 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Col11a1Q61245 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a1Q61245 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col11a1Q61245 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a1Q61245 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.2■□□□□ 0.02
Col11a1Q61245 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm8385-201ENSMUST00000058999 643 ntBASIC15.2■□□□□ 0.02
Col11a1Q61245 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.2■□□□□ 0.02
Col11a1Q61245 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.2■□□□□ 0.02
Col11a1Q61245 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm22121-201ENSMUST00000175148 54 ntBASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a1Q61245 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.2■□□□□ 0.02
Col11a1Q61245 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col11a1Q61245 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col11a1Q61245 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a1Q61245 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a1Q61245 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Col11a1Q61245 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col11a1Q61245 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a1Q61245 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col11a1Q61245 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms