Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.07□□□□□ -0.32
Tnfaip3Q60769 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfaip3Q60769 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Gm6912-201ENSMUST00000117218 544 ntBASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Gm8584-201ENSMUST00000171982 758 ntBASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.06□□□□□ -0.32
Tnfaip3Q60769 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfaip3Q60769 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Tnfaip3Q60769 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms