Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-3Q5R1C3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Map1b-203ENSMUST00000223725 2669 ntBASIC10.41□□□□□ -0.74
Trav3-3Q5R1C3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-3Q5R1C3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms