Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf20Q5DTM8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm27680-201ENSMUST00000184192 160 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf20Q5DTM8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm15393-201ENSMUST00000120499 219 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm3436-201ENSMUST00000179930 840 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm37444-201ENSMUST00000193605 439 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm6888-201ENSMUST00000221983 706 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf20Q5DTM8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm4804-201ENSMUST00000182234 999 ntBASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm17837-201ENSMUST00000186435 985 ntBASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Gm44719-201ENSMUST00000206404 149 ntBASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf20Q5DTM8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms