Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx49Q4FZF3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx49Q4FZF3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ddx49Q4FZF3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Gm27514-201ENSMUST00000183692 110 ntBASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Gm18054-201ENSMUST00000207539 555 ntBASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx49Q4FZF3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 BC037039-201ENSMUST00000192003 2205 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm8927-201ENSMUST00000181978 981 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm3222-201ENSMUST00000071282 990 ntBASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx49Q4FZF3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Gm12485-201ENSMUST00000119641 291 ntBASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Gm43818-201ENSMUST00000200605 466 ntBASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Gm6013-201ENSMUST00000212264 699 ntBASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx49Q4FZF3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms