Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm18057-201ENSMUST00000208220 503 ntBASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc27Q3V036 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm45743-201ENSMUST00000212701 2795 ntBASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm37105-201ENSMUST00000192251 2085 ntBASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.7■□□□□ 0.42
Ccdc27Q3V036 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.69■□□□□ 0.42
Ccdc27Q3V036 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gm43061-201ENSMUST00000198850 2241 ntBASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc27Q3V036 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.68■□□□□ 0.42
Ccdc27Q3V036 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.68■□□□□ 0.42
Ccdc27Q3V036 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc27Q3V036 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms