Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SfswapQ3USH5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.52■□□□□ 0.24
SfswapQ3USH5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SfswapQ3USH5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SfswapQ3USH5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SfswapQ3USH5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SfswapQ3USH5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SfswapQ3USH5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.51■□□□□ 0.23
SfswapQ3USH5 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SfswapQ3USH5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Gm12485-201ENSMUST00000119641 291 ntBASIC16.5■□□□□ 0.23
SfswapQ3USH5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Gm5356-201ENSMUST00000093326 615 ntBASIC16.5■□□□□ 0.23
SfswapQ3USH5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.5■□□□□ 0.23
SfswapQ3USH5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SfswapQ3USH5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SfswapQ3USH5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SfswapQ3USH5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms