Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Ntng1-201ENSMUST00000051253 327 ntBASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Spg11Q3UHA3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Gm5950-201ENSMUST00000213337 772 ntBASIC12.65□□□□□ -0.38
Spg11Q3UHA3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Mir497b-201ENSMUST00000093601 125 ntBASIC12.65□□□□□ -0.38
Spg11Q3UHA3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.65□□□□□ -0.38
Spg11Q3UHA3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Spg11Q3UHA3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Spg11Q3UHA3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Spg11Q3UHA3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Spg11Q3UHA3 Gm14460-201ENSMUST00000121511 639 ntBASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Gm19353-201ENSMUST00000184561 445 ntBASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Spg11Q3UHA3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms