Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.29□□□□□ -0.44
Chd8Q09XV5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.29□□□□□ -0.44
Chd8Q09XV5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chd8Q09XV5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm8913-201ENSMUST00000209491 641 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm26315-201ENSMUST00000083890 321 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd8Q09XV5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Gm11354-201ENSMUST00000121974 422 ntBASIC12.27□□□□□ -0.44
Chd8Q09XV5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Gm18734-201ENSMUST00000172937 808 ntBASIC12.27□□□□□ -0.44
Chd8Q09XV5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.27□□□□□ -0.44
Chd8Q09XV5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chd8Q09XV5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chd8Q09XV5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Gm11930-201ENSMUST00000117788 190 ntBASIC12.27□□□□□ -0.45
Chd8Q09XV5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.27□□□□□ -0.45
Chd8Q09XV5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms