Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tff1Q08423 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tff1Q08423 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.56□□□□□ -0.56
Tff1Q08423 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tff1Q08423 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tff1Q08423 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.56□□□□□ -0.56
Tff1Q08423 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.56□□□□□ -0.56
Tff1Q08423 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tff1Q08423 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.55□□□□□ -0.56
Tff1Q08423 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Tff1Q08423 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.55□□□□□ -0.56
Tff1Q08423 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Tff1Q08423 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Tff1Q08423 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Gm5866-201ENSMUST00000177881 973 ntBASIC11.55□□□□□ -0.56
Tff1Q08423 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Grk6-205ENSMUST00000224653 2976 ntBASIC11.55□□□□□ -0.56
Tff1Q08423 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Tff1Q08423 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.55□□□□□ -0.56
Tff1Q08423 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Tff1Q08423 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.55□□□□□ -0.56
Tff1Q08423 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tff1Q08423 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tff1Q08423 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tff1Q08423 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tff1Q08423 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms