Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.07□□□□□ -0.16
Ebf1Q07802 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf1Q07802 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
Ebf1Q07802 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ebf1Q07802 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm15957-201ENSMUST00000118893 974 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Mir1894-201ENSMUST00000122802 81 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm6244-201ENSMUST00000178732 841 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm45841-201ENSMUST00000207700 164 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm17795-201ENSMUST00000214505 757 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.06□□□□□ -0.16
Ebf1Q07802 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.06□□□□□ -0.16
Ebf1Q07802 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf1Q07802 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Gm12742-201ENSMUST00000117326 410 ntBASIC14.05□□□□□ -0.16
Ebf1Q07802 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ebf1Q07802 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf1Q07802 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf1Q07802 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.04□□□□□ -0.16
Ebf1Q07802 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.04□□□□□ -0.16
Ebf1Q07802 Gm44487-201ENSMUST00000205145 325 ntBASIC14.04□□□□□ -0.16
Ebf1Q07802 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms