Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a2Q07643 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a2Q07643 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col9a2Q07643 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col9a2Q07643 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15□□□□□ -0.01
Col9a2Q07643 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Col9a2Q07643 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.99□□□□□ -0.01
Col9a2Q07643 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.99□□□□□ -0.01
Col9a2Q07643 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.99□□□□□ -0.01
Col9a2Q07643 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col9a2Q07643 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col9a2Q07643 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.98□□□□□ -0.01
Col9a2Q07643 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm7287-201ENSMUST00000205267 602 ntBASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm7561-201ENSMUST00000211203 886 ntBASIC14.98□□□□□ -0.01
Col9a2Q07643 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.98□□□□□ -0.01
Col9a2Q07643 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.98□□□□□ -0.01
Col9a2Q07643 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Col9a2Q07643 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col9a2Q07643 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col9a2Q07643 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col9a2Q07643 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.97□□□□□ -0.01
Col9a2Q07643 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.97□□□□□ -0.01
Col9a2Q07643 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.97□□□□□ -0.01
Col9a2Q07643 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.97□□□□□ -0.01
Col9a2Q07643 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col9a2Q07643 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.97□□□□□ -0.01
Col9a2Q07643 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col9a2Q07643 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col9a2Q07643 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a2Q07643 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a2Q07643 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a2Q07643 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Col9a2Q07643 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.96□□□□□ -0.01
Col9a2Q07643 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col9a2Q07643 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col9a2Q07643 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms