Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC20.83■□□□□ 0.93
Col17a1Q07563 Mir6998-201ENSMUST00000183343 64 ntBASIC20.83■□□□□ 0.93
Col17a1Q07563 Gm43752-201ENSMUST00000198475 697 ntBASIC20.83■□□□□ 0.93
Col17a1Q07563 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.83■□□□□ 0.93
Col17a1Q07563 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.83■□□□□ 0.93
Col17a1Q07563 AC122305.4-201ENSMUST00000216159 1206 ntBASIC20.83■□□□□ 0.93
Col17a1Q07563 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col17a1Q07563 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.83■□□□□ 0.93
Col17a1Q07563 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Col17a1Q07563 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col17a1Q07563 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Col17a1Q07563 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col17a1Q07563 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col17a1Q07563 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Col17a1Q07563 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col17a1Q07563 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.83■□□□□ 0.92
Col17a1Q07563 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col17a1Q07563 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC20.82■□□□□ 0.92
Col17a1Q07563 Gm3809-201ENSMUST00000180973 1006 ntBASIC20.82■□□□□ 0.92
Col17a1Q07563 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC20.82■□□□□ 0.92
Col17a1Q07563 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC20.82■□□□□ 0.92
Col17a1Q07563 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Col17a1Q07563 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col17a1Q07563 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
Col17a1Q07563 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm13035-201ENSMUST00000117496 342 ntBASIC20.81■□□□□ 0.92
Col17a1Q07563 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC20.81■□□□□ 0.92
Col17a1Q07563 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm19091-201ENSMUST00000208120 978 ntBASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.81■□□□□ 0.92
Col17a1Q07563 Gzmn-202ENSMUST00000225535 989 ntBASIC20.81■□□□□ 0.92
Col17a1Q07563 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col17a1Q07563 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Col17a1Q07563 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.8■□□□□ 0.92
Col17a1Q07563 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 AC159308.2-201ENSMUST00000213592 2325 ntBASIC20.8■□□□□ 0.92
Col17a1Q07563 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Col17a1Q07563 Gm6630-201ENSMUST00000119199 454 ntBASIC20.8■□□□□ 0.92
Col17a1Q07563 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col17a1Q07563 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col17a1Q07563 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.79■□□□□ 0.92
Col17a1Q07563 Gm14150-201ENSMUST00000122404 1354 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms