Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col10a1Q05306 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col10a1Q05306 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.82□□□□□ -0.36
Col10a1Q05306 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.82□□□□□ -0.36
Col10a1Q05306 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.82□□□□□ -0.36
Col10a1Q05306 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.82□□□□□ -0.36
Col10a1Q05306 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col10a1Q05306 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.81□□□□□ -0.36
Col10a1Q05306 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.81□□□□□ -0.36
Col10a1Q05306 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.81□□□□□ -0.36
Col10a1Q05306 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Col10a1Q05306 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col10a1Q05306 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
Col10a1Q05306 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Gm27838-201ENSMUST00000184829 128 ntBASIC12.8□□□□□ -0.36
Col10a1Q05306 Gm29741-201ENSMUST00000192667 421 ntBASIC12.8□□□□□ -0.36
Col10a1Q05306 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.8□□□□□ -0.36
Col10a1Q05306 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col10a1Q05306 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col10a1Q05306 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms