Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Gm24543-201ENSMUST00000103867 82 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 Gm8396-201ENSMUST00000057361 823 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.97□□□□□ -0.17
Pfdn6Q03958 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pfdn6Q03958 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.96□□□□□ -0.17
Pfdn6Q03958 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pfdn6Q03958 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Pfdn6Q03958 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Pfdn6Q03958 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pfdn6Q03958 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm6415-201ENSMUST00000118488 348 ntBASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm15653-201ENSMUST00000119247 907 ntBASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm29541-201ENSMUST00000191351 678 ntBASIC13.95□□□□□ -0.18
Pfdn6Q03958 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm5779-201ENSMUST00000218467 910 ntBASIC13.95□□□□□ -0.18
Pfdn6Q03958 Gm18027-201ENSMUST00000218947 619 ntBASIC13.95□□□□□ -0.18
Pfdn6Q03958 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pfdn6Q03958 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms