Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.14□□□□□ -0.31
Nkx3-2P97503 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nkx3-2P97503 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.13□□□□□ -0.31
Nkx3-2P97503 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.13□□□□□ -0.31
Nkx3-2P97503 Gm9797-201ENSMUST00000052902 613 ntBASIC13.13□□□□□ -0.31
Nkx3-2P97503 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nkx3-2P97503 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.12□□□□□ -0.31
Nkx3-2P97503 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm15823-201ENSMUST00000064305 670 ntBASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx3-2P97503 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx3-2P97503 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx3-2P97503 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms